MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4036_ses-1_run-02_T1w.
  • Date and time: 2022-12-06, 01:57.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5328057096170681
cnr2.342308107189571
efc0.5577572428151347
fber206.20960000000002
fwhmavg4.811796666666667
fwhmx3.5937
fwhmy5.647
fwhmz5.19469
icvscsf0.30722953538848236
icvsgm0.36046336008297725
icvswm0.33230710452854045
inumed1.5456421375274658
inurange0.8145403027534486
qi10.00897095346074938
qi20.0005030879465125218
rpvecsf19.49793196871027
rpvegm13.771410591806607
rpvewm17.4412375518569
sizex54
sizey256
sizez256
snrcsf3.543253044070304
snrgm7.405819167526271
snrtotal6.258250449383176
snrwm7.825679136552956
snrdcsf11.265932858302186
snrdgm23.2009233301
snrdtotal24.016351725844157
snrdwm37.58219898913028
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk68.37540758953503
summarybgmad17.432091907306013
summarybgmean40.42468784718626
summarybgmedian25.211012050509453
summarybgn1029563.0
summarybgp058.477387093007565
summarybgp95117.20909111201763
summarybgstdv58.438672610681124
summarycsfk0.24124794457462606
summarycsfmad82.35160659658358
summarycsfmean299.79801862485647
summarycsfmedian299.7677792496979
summarycsfn19457.0
summarycsfp05160.45113692730666
summarycsfp95440.4186885841191
summarycsfstdv84.60024505227007
summarygmk0.28266321333394107
summarygmmad80.82151702478242
summarygmmean617.8721763440753
summarygmmedian617.3380713947117
summarygmn2718.0
summarygmp05483.52620195206254
summarygmp95756.8906062275171
summarygmstdv83.34317679359576
summarywmk0.6941558638026009
summarywmmad123.06291841772145
summarywmmean1015.0214197603461
summarywmmedian999.9999531321228
summarywmn40217.0
summarywmp05830.7397052690387
summarywmp951245.2175893485546
summarywmstdv127.78284198123868
tpmoverlapcsf0.06276385486125946
tpmoverlapgm0.24906207621097565
tpmoverlapwm0.23724818229675293
wm2max0.6340762697627936
AcquisitionMatrixPE256
AcquisitionNumber1
AcquisitionTime17:04:43.762500
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.00204884, 0.95387, 0.300213, -0.0348353, 0.299963, -0.953314]
ImageOrientationTextSag>Tra(1.9)>Cor(-0.7)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.259
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps191
PhaseResolution1
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0294558
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber33
ShimSetting[2606, 5407, -7554, -76, 11, -507, 193, -253]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp234.94
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sumaa8422bfbcb57a295b7c437894522867
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.